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miRTCat: a comprehensive searchable map of miRNA target sites including non-canonical nucleation bulges, not only mapped in experimentally verified miRNA-bound regions but also predicted in all 3’ untranslated regions (3’UTRs) derived from human and mouse.

miRTCat provides search option for miRNA target sites for human (hg19) and mouse (mm9), encompassing target sites for conserved miRNA families across most vertebrates, within Ago bound regions or entire 3'UTRs. Please select a species and click a corresponding icons below for your search.

 

 

genome: hg19 / mm9

 

 

We kindly ask users to cite the following reference if they include miRTCat results in their manuscripts:

Kim KK, Ham J, Chi SW.
miRTCat: a comprehensive map of human and mouse microRNA target sites including non-canonical nucleation bulges.
Bioinformatics 2013 Aug;29(15):1898-9. Epub 2013 May 24.

 

Contact:Contact Ka-Kyung Kim at kakyung.kim@gmail.com

 

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